STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2155KEGG: dge:Dgeo_1790 glyoxalase/bleomycin resistance protein/dioxygenase. (139 aa)    
Predicted Functional Partners:
Sare_0776
KEGG: stp:Strop_0832 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
 
  
 0.963
Sare_4204
PFAM: cobalamin B12-binding domain protein; KEGG: stp:Strop_3814 cobalamin B12-binding domain protein.
 
  
 0.959
Sare_3989
KEGG: stp:Strop_3608 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
 
  
 0.956
Sare_4003
KEGG: stp:Strop_3621 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
 
  
 0.942
Sare_0802
PFAM: carboxyl transferase; KEGG: stp:Strop_0856 carboxyl transferase.
 
 
 0.933
Sare_3624
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: stp:Strop_3382 propionyl-CoA carboxylase.
 
 
 0.927
Sare_3993
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3611 glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 
0.925
Sare_0792
Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: stp:Strop_0849 carbamoyl-phosphate synthase L chain, ATP-binding.
    
 0.903
Sare_4768
Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: stp:Strop_4328 carbamoyl-phosphate synthase L chain, ATP-binding.
    
 0.903
Sare_3990
KEGG: stp:Strop_3609 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase.
 
  
 0.643
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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