STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2163PFAM: regulatory protein ArsR; KEGG: mxa:MXAN_5617 transcriptional regulator, ArsR family. (141 aa)    
Predicted Functional Partners:
Sare_2023
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_5618 Aha1 domain protein.
    0.719
Sare_0241
PFAM: regulatory protein ArsR; KEGG: sen:SACE_6152 possible transcriptional regulator, ArsR family.
  
     0.674
Sare_2166
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_5618 Aha1 domain protein.
    0.671
Sare_2164
Hypothetical protein.
       0.634
Sare_2108
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: stp:Strop_2048 activator of HSP90 ATPase 1 family protein.
 
    0.616
Sare_1205
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: stp:Strop_2682 activator of HSP90 ATPase 1 family protein.
 
    0.607
Sare_2115
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: lic:LIC10664 hypothetical protein.
 
    0.590
Sare_2162
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: stp:Strop_2055 monooxygenase, FAD-binding.
       0.459
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.