STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2245PFAM: DoxX family protein; KEGG: stp:Strop_2102 DoxX family protein. (188 aa)    
Predicted Functional Partners:
Sare_0028
PFAM: Rhodanese domain protein; KEGG: kra:Krad_3079 rhodanese domain protein.
     
  0.900
Sare_0340
PFAM: Rhodanese domain protein; KEGG: stp:Strop_0296 rhodanese domain protein.
     
  0.900
Sare_1421
PFAM: Rhodanese domain protein; KEGG: stp:Strop_1460 rhodanese domain protein.
     
  0.900
Sare_2246
KEGG: stp:Strop_2103 hypothetical protein.
  
    0.530
Sare_2244
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: stp:Strop_2101 peptidylprolyl isomerase, FKBP-type.
       0.494
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
       0.449
Sare_1529
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_1578 ATP-binding region, ATPase domain protein domain protein.
 
     0.407
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.