STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2248KEGG: stp:Strop_2105 hypothetical protein. (114 aa)    
Predicted Functional Partners:
Sare_3609
KEGG: stp:Strop_3369 hypothetical protein.
  
     0.588
Sare_2275
KEGG: stp:Strop_2128 hypothetical protein.
  
     0.573
Sare_3840
KEGG: stp:Strop_3460 hypothetical protein.
  
     0.571
Sare_0891
KEGG: stp:Strop_0949 hypothetical protein.
  
     0.568
Sare_2414
KEGG: stp:Strop_3348 hypothetical protein.
  
     0.560
Sare_3850
KEGG: stp:Strop_3348 hypothetical protein.
  
     0.558
Sare_2417
KEGG: stp:Strop_3348 hypothetical protein.
  
     0.556
Sare_0072
KEGG: stp:Strop_3471 hypothetical protein.
  
     0.554
Sare_2996
KEGG: stp:Strop_3348 hypothetical protein.
  
     0.554
Sare_0502
KEGG: stp:Strop_0414 hypothetical protein.
  
     0.547
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.