STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2764KEGG: stp:Strop_2568 hypothetical protein. (187 aa)    
Predicted Functional Partners:
Sare_2765
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: stp:Strop_2569 ATP-binding region, ATPase domain protein domain protein.
 
     0.944
Sare_2766
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: stp:Strop_2570 response regulator receiver.
 
   
 0.882
Sare_2668
PFAM: protein of unknown function DUF407; KEGG: stp:Strop_2485 protein of unknown function DUF407.
  
     0.710
Sare_0874
KEGG: stp:Strop_0932 hypothetical protein.
  
     0.682
Sare_0035
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: stp:Strop_0029 helix-turn-helix domain protein.
  
     0.649
Sare_0105
KEGG: stp:Strop_0106 hypothetical protein.
  
     0.629
Sare_0385
PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_0323 GCN5-related N-acetyltransferase.
  
     0.611
Sare_0161
KEGG: stp:Strop_0153 hypothetical protein.
  
     0.599
Sare_1697
KEGG: stp:Strop_1699 hypothetical protein.
  
     0.588
Sare_2767
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ppr:PBPRA0351 hypothetical anti-anti-sigma regulatory factor.
     
 0.588
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.