STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2799PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_2600 alcohol dehydrogenase GroES domain protein. (363 aa)    
Predicted Functional Partners:
Sare_0238
PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_0078 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.917
Sare_0771
PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_0827 aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
 
 0.917
Sare_0895
PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_0957 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.917
Sare_2802
PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_2603 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.917
Sare_3197
PFAM: alpha/beta hydrolase fold; KEGG: stp:Strop_2973 alpha/beta hydrolase fold.
   
 0.906
Sare_4900
PFAM: alpha/beta hydrolase fold; KEGG: stp:Strop_4425 alpha/beta hydrolase fold.
   
 0.906
Sare_2502
PFAM: putative esterase; KEGG: mxa:MXAN_4935 putative esterase.
  
 
 0.793
Sare_2504
PFAM: putative esterase; KEGG: mtu:Rv1288 hypothetical protein.
  
 
 0.793
Sare_2723
PFAM: putative esterase; KEGG: efa:EF0786 tributyrin esterase, putative.
  
 
 0.793
Sare_2101
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_2723 alcohol dehydrogenase GroES domain protein.
  
 
 
0.790
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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