STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2831PFAM: luciferase family protein; KEGG: stp:Strop_2634 luciferase family protein. (290 aa)    
Predicted Functional Partners:
Sare_2839
PFAM: protein of unknown function DUF35; KEGG: stp:Strop_2642 protein of unknown function DUF35.
 
   
 0.757
Sare_2821
PFAM: protein of unknown function DUF35; KEGG: stp:Strop_2623 protein of unknown function DUF35.
 
     0.744
Sare_2441
KEGG: mav:MAV_0635 hypothetical protein.
  
     0.740
Sare_2840
KEGG: stp:Strop_2643 hypothetical protein.
  
   
 0.732
Sare_2820
KEGG: stp:Strop_2622 hypothetical protein.
  
     0.730
Sare_2823
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: stp:Strop_2625 regulatory protein, TetR.
  
     0.725
Sare_2881
KEGG: stp:Strop_2673 hypothetical protein.
  
     0.724
Sare_2880
PFAM: Rieske [2Fe-2S] domain protein; KEGG: stp:Strop_2672 Rieske (2Fe-2S) domain protein.
  
     0.723
Sare_2830
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_2633 short-chain dehydrogenase/reductase SDR.
 
     0.704
Sare_2841
KEGG: stp:Strop_2644 propanoyl-CoA C-acyltransferase.
  
     0.697
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.