STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2887PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2679 acyl-CoA dehydrogenase domain protein. (339 aa)    
Predicted Functional Partners:
Sare_2886
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2678 acyl-CoA dehydrogenase domain protein.
     0.970
Sare_2808
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2609 acyl-CoA dehydrogenase domain protein.
 
     0.813
Sare_2817
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2618 acyl-CoA dehydrogenase domain protein.
  
     0.772
Sare_2822
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2624 acyl-CoA dehydrogenase domain protein.
 
     0.768
Sare_1468
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_1526 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.767
Sare_2814
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2615 acyl-CoA dehydrogenase domain protein.
 
     0.760
Sare_4766
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_4326 acyl-CoA dehydrogenase domain protein.
 
     0.754
Sare_2816
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2617 acyl-CoA dehydrogenase domain protein.
 
     0.752
Sare_0490
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein.
  
     0.746
Sare_1049
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: fra:Francci3_3276 acyl-CoA dehydrogenase-like.
  
     0.745
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.