STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_3040KEGG: stp:Strop_2864 hypothetical protein. (117 aa)    
Predicted Functional Partners:
kptA
Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.558
Sare_3041
PFAM: transposase IS4 family protein; KEGG: sma:SAV7558 IS493-like transposase.
       0.553
Sare_1769
PFAM: ADP-ribosylation/Crystallin J1; KEGG: stp:Strop_1782 ADP-ribosylation/crystallin J1.
  
     0.492
Sare_0964
PFAM: Ricin B lectin; KEGG: stp:Strop_1075 ricin B lectin.
  
     0.483
Sare_1970
PFAM: conserved hypothetical protein; KEGG: sma:SAV2593 hypothetical protein.
 
     0.467
Sare_2007
KEGG: sco:SCO4954 hypothetical protein 2SCK3114c.
 
     0.430
Sare_3180
PFAM: glycoside hydrolase family 48; PKD domain containing protein; cellulose-binding family II; KEGG: stp:Strop_2957 glycoside hydrolase, family 48.
  
     0.420
Sare_1188
PFAM: nitrogen regulatory protein P-II; KEGG: stp:Strop_1299 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.407
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.