Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sare_3091 | Sare_3092 | SMART: serine/threonine protein kinase; KEGG: fal:FRAAL1817 putative serine/threonine protein kinase. | KEGG: fal:FRAAL0246 hypothetical protein; putative helicase. | 0.672 |
Sare_3091 | Sare_3093 | SMART: serine/threonine protein kinase; KEGG: fal:FRAAL1817 putative serine/threonine protein kinase. | KEGG: fal:FRAAL0247 hypothetical protein. | 0.457 |
Sare_3092 | Sare_3091 | KEGG: fal:FRAAL0246 hypothetical protein; putative helicase. | SMART: serine/threonine protein kinase; KEGG: fal:FRAAL1817 putative serine/threonine protein kinase. | 0.672 |
Sare_3092 | Sare_3093 | KEGG: fal:FRAAL0246 hypothetical protein; putative helicase. | KEGG: fal:FRAAL0247 hypothetical protein. | 0.640 |
Sare_3093 | Sare_3091 | KEGG: fal:FRAAL0247 hypothetical protein. | SMART: serine/threonine protein kinase; KEGG: fal:FRAAL1817 putative serine/threonine protein kinase. | 0.457 |
Sare_3093 | Sare_3092 | KEGG: fal:FRAAL0247 hypothetical protein. | KEGG: fal:FRAAL0246 hypothetical protein; putative helicase. | 0.640 |
Sare_3093 | Sare_3094 | KEGG: fal:FRAAL0247 hypothetical protein. | PFAM: Recombinase; KEGG: stp:Strop_2909 recombinase. | 0.447 |
Sare_3094 | Sare_3093 | PFAM: Recombinase; KEGG: stp:Strop_2909 recombinase. | KEGG: fal:FRAAL0247 hypothetical protein. | 0.447 |