STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_3141KEGG: nca:Noca_1349 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit. (253 aa)    
Predicted Functional Partners:
Sare_3138
KEGG: nca:Noca_1346 nitrate reductase, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.999
Sare_3139
TIGRFAM: nitrate reductase, beta subunit; KEGG: nca:Noca_1347 nitrate reductase, beta subunit.
 
 0.999
Sare_0192
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: stp:Strop_0177 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.998
Sare_0193
TIGRFAM: nitrate reductase, beta subunit; KEGG: stp:Strop_0178 nitrate reductase, beta subunit.
 
 0.997
Sare_3140
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: sco:SCO0218 putative nitrate reductase delta chain NarJ2.
 
  
 0.990
Sare_3142
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO0213 putative nitrate/nitrite transporter protein.
 
 
 0.990
Sare_0194
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: stp:Strop_0179 nitrate reductase molybdenum cofactor assembly chaperone.
  
 0.959
Sare_4261
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: stp:Strop_3870 nitrite reductase (NAD(P)H), small subunit.
  
 
 0.938
Sare_4260
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: stp:Strop_3869 nitrite reductase (NAD(P)H), large subunit.
  
 
 0.934
Sare_0191
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0176 major facilitator superfamily MFS_1.
 
 
 0.928
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.