Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sare_3206PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2982 binding-protein-dependent transport systems inner membrane component. (313 aa)    
Predicted Functional Partners:
Sare_3205
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2981 binding-protein-dependent transport systems inner membrane component.
 
 0.993
Sare_3207
PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_2983 extracellular solute-binding protein, family 1.
 
 0.988
Sare_4657
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4220 ABC transporter related.
 
 
 0.975
Sare_2551
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2402 ABC transporter related.
 
 
 0.970
Sare_0747
PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_0803 extracellular solute-binding protein, family 1.
 
 
 0.932
Sare_0749
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_0805 binding-protein-dependent transport systems inner membrane component.
 
 
 0.930
Sare_2552
PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_2403 extracellular solute-binding protein, family 1.
 
 
 0.920
Sare_2553
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2404 binding-protein-dependent transport systems inner membrane component.
 
 
 0.873
Sare_1082
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1189 binding-protein-dependent transport systems inner membrane component.
 
 
 0.872
Sare_1508
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1559 binding-protein-dependent transport systems inner membrane component.
 
 
 0.872
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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