STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_3240PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: stp:Strop_3015 glycosyl transferase, family 51. (758 aa)    
Predicted Functional Partners:
Sare_0051
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; KEGG: stp:Strop_0046 peptidoglycan glycosyltransferase.
 
 
 
 0.779
Sare_3440
PFAM: cell cycle protein; KEGG: stp:Strop_3214 cell cycle protein; Belongs to the SEDS family.
  
 
 
 0.733
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
   
 0.717
Sare_3432
PFAM: DivIVA family protein; KEGG: stp:Strop_3206 DivIVA family protein.
   
 
 0.702
Sare_0650
KEGG: stp:Strop_0703 hypothetical protein.
   
 
 0.671
Sare_4738
PFAM: peptidase M23B; KEGG: stp:Strop_4302 peptidase M23B.
  
     0.643
Sare_3444
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: stp:Strop_3218 penicillin-binding protein, transpeptidase.
 
 
 
 0.635
Sare_4206
PFAM: peptidase M23B; KEGG: stp:Strop_3816 peptidase M23B.
  
     0.630
murG-2
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
  
 0.626
Sare_4205
PFAM: peptidase M23B; KEGG: stp:Strop_3815 peptidase M23B.
  
   
 0.611
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.