STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_3273KEGG: stp:Strop_3047 hypothetical protein. (489 aa)    
Predicted Functional Partners:
Sare_3270
KEGG: stp:Strop_3044 hypothetical protein.
       0.801
Sare_3278
KEGG: stp:Strop_3052 hypothetical protein.
       0.795
Sare_3269
KEGG: stp:Strop_3043 hypothetical protein.
       0.785
Sare_3271
PFAM: Lantibiotic dehydratase domain protein; KEGG: stp:Strop_3045 lantibiotic dehydratase domain protein.
       0.785
Sare_3272
PFAM: Lantibiotic dehydratase domain protein; KEGG: stp:Strop_3046 lantibiotic dehydratase domain protein.
       0.785
Sare_3274
PFAM: Lantibiotic dehydratase domain protein; KEGG: stp:Strop_3048 lantibiotic dehydratase domain protein.
       0.785
Sare_3275
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: stp:Strop_3049 peptidase U62, modulator of DNA gyrase.
       0.785
Sare_3276
KEGG: stp:Strop_3050 hypothetical protein.
       0.785
Sare_3277
PFAM: FAD dependent oxidoreductase; KEGG: stp:Strop_3051 FAD dependent oxidoreductase.
       0.785
Sare_3268
PFAM: NADPH-dependent FMN reductase; KEGG: stp:Strop_3042 NADPH-dependent FMN reductase.
       0.564
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.