STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_3452TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rrs:RoseRS_2096 monovalent cation/proton antiporter, MnhG/PhaG subunit. (118 aa)    
Predicted Functional Partners:
Sare_3455
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: stp:Strop_3229 NADH/ubiquinone/plastoquinone (complex I).
 
 
 0.999
Sare_3457
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: stp:Strop_3231 NADH dehydrogenase (quinone).
 
 
 0.999
Sare_3454
PFAM: cation antiporter; KEGG: stp:Strop_3228 cation antiporter.
 
 
 0.998
Sare_3456
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: stp:Strop_3230 NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.998
Sare_3453
KEGG: stp:Strop_3227 multiple resistance and pH regulation protein F.
 
 
 0.996
Sare_0471
KEGG: stp:Strop_0403 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 
 0.881
Sare_4452
KEGG: stp:Strop_4054 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).
 
 
 0.871
Sare_0713
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: stp:Strop_0771 NADH dehydrogenase (quinone).
 
 
 0.867
Sare_1328
PFAM: protein of unknown function DUF503; KEGG: stp:Strop_1371 protein of unknown function DUF503.
   
    0.671
leuS
TIGRFAM: leucyl-tRNA synthetase; KEGG: stp:Strop_3225 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.427
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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