STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_3986PFAM: NAD-glutamate dehydrogenase; KEGG: stp:Strop_3605 NAD-glutamate dehydrogenase. (1685 aa)    
Predicted Functional Partners:
Sare_3392
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: stp:Strop_3167 ferredoxin-dependent glutamate synthase.
     
 0.970
Sare_3568
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: stp:Strop_3332 glutamine synthetase, type I.
     
 0.957
Sare_3584
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: stp:Strop_3339 glutamine synthetase, type I.
     
 0.943
Sare_2520
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: stp:Strop_2382 forkhead-associated protein.
    
 
 0.923
Sare_3391
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: stp:Strop_3166 glutamate synthase, NADH/NADPH, small subunit.
     
 0.914
Sare_4142
PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_3760 GCN5-related N-acetyltransferase.
  
  
  0.911
Sare_2957
KEGG: rha:RHA1_ro00339 glutamate dehydrogenase (NAD(P)+).
    
 0.909
Sare_4260
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: stp:Strop_3869 nitrite reductase (NAD(P)H), large subunit.
    
  0.907
Sare_2341
TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_4374 glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.906
Sare_0915
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_0978 delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.902
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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