STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4113KEGG: stp:Strop_3732 hypothetical protein. (220 aa)    
Predicted Functional Partners:
Sare_4114
PFAM: protein of unknown function DUF45; KEGG: stp:Strop_3733 protein of unknown function DUF45.
       0.891
Sare_0111
KEGG: stp:Strop_0112 hypothetical protein.
  
     0.758
Sare_2392
KEGG: stp:Strop_2273 hypothetical protein.
  
     0.743
Sare_1823
KEGG: stp:Strop_1832 hypothetical protein.
  
     0.719
Sare_4104
KEGG: stp:Strop_3723 hypothetical protein.
  
     0.678
Sare_1829
KEGG: stp:Strop_1838 hypothetical protein.
  
     0.617
Sare_4536
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_4115 methyltransferase type 12.
 
     0.613
Sare_0764
KEGG: stp:Strop_0820 hypothetical protein.
  
     0.611
Sare_3955
KEGG: stp:Strop_3576 hypothetical protein.
  
     0.604
Sare_4438
KEGG: stp:Strop_4045 hypothetical protein.
  
     0.600
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.