STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4187Hypothetical protein. (205 aa)    
Predicted Functional Partners:
Sare_4185
KEGG: reu:Reut_B4079 hypothetical protein.
 
   
 0.947
Sare_4184
Hypothetical protein; KEGG: osa:4335047 Os04g0165600; Belongs to the peptidase S26 family.
 
     0.942
Sare_4186
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0530 ABC transporter related.
 
     0.929
Sare_1084
PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: stp:Strop_1191 glycoside hydrolase, family 38.
  
    0.587
Sare_1287
PFAM: Terpene synthase metal-binding domain protein.
  
     0.567
Sare_0324
PFAM: protein of unknown function DUF402; KEGG: stp:Strop_0281 protein of unknown function DUF402.
  
     0.557
Sare_1929
PFAM: cell divisionFtsK/SpoIIIE; KEGG: sen:SACE_7023 hypothetical protein.
  
     0.512
Sare_0723
KEGG: bmn:BMA10247_0293 hypothetical protein.
  
     0.494
Sare_2654
PFAM: Radical SAM domain protein; KEGG: sma:SAV5715 hypothetical protein.
  
     0.469
Sare_1288
KEGG: bja:blr2149 hypothetical protein.
  
     0.442
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.