Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sare_4358 | Sare_4359 | PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3973 AMP-dependent synthetase and ligase. | PFAM: NUDIX hydrolase; KEGG: stp:Strop_3974 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.556 |
Sare_4358 | Sare_4360 | PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3973 AMP-dependent synthetase and ligase. | rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.421 |
Sare_4358 | Sare_4361 | PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3973 AMP-dependent synthetase and ligase. | PFAM: glycosyl transferase family 2; KEGG: stp:Strop_3976 glycosyl transferase, family 2. | 0.439 |
Sare_4359 | Sare_4358 | PFAM: NUDIX hydrolase; KEGG: stp:Strop_3974 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3973 AMP-dependent synthetase and ligase. | 0.556 |
Sare_4359 | Sare_4360 | PFAM: NUDIX hydrolase; KEGG: stp:Strop_3974 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.570 |
Sare_4359 | Sare_4361 | PFAM: NUDIX hydrolase; KEGG: stp:Strop_3974 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | PFAM: glycosyl transferase family 2; KEGG: stp:Strop_3976 glycosyl transferase, family 2. | 0.572 |
Sare_4360 | Sare_4358 | rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3973 AMP-dependent synthetase and ligase. | 0.421 |
Sare_4360 | Sare_4359 | rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | PFAM: NUDIX hydrolase; KEGG: stp:Strop_3974 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.570 |
Sare_4360 | Sare_4361 | rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | PFAM: glycosyl transferase family 2; KEGG: stp:Strop_3976 glycosyl transferase, family 2. | 0.973 |
Sare_4361 | Sare_4358 | PFAM: glycosyl transferase family 2; KEGG: stp:Strop_3976 glycosyl transferase, family 2. | PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3973 AMP-dependent synthetase and ligase. | 0.439 |
Sare_4361 | Sare_4359 | PFAM: glycosyl transferase family 2; KEGG: stp:Strop_3976 glycosyl transferase, family 2. | PFAM: NUDIX hydrolase; KEGG: stp:Strop_3974 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.572 |
Sare_4361 | Sare_4360 | PFAM: glycosyl transferase family 2; KEGG: stp:Strop_3976 glycosyl transferase, family 2. | rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.973 |