STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4532PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: stp:Strop_4111 protein phosphatase 2C domain protein. (239 aa)    
Predicted Functional Partners:
Sare_0053
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0048 protein kinase.
 
 0.963
Sare_3480
PFAM: protein of unknown function RIO1; protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_3253 protein kinase.
 
 0.962
Sare_3610
Transketolase domain protein; PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: stp:Strop_3370 transketolase domain protein.
  
 0.877
Sare_2255
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_2112 protein kinase.
 
 0.848
Sare_0052
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0047 protein kinase.
 
 0.843
Sare_0775
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0831 protein kinase.
 
 0.840
Sare_0798
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0852 protein kinase.
 
 0.839
Sare_4785
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_4344 protein kinase.
 
 
 0.837
Sare_5094
SMART: serine/threonine protein kinase; KEGG: stp:Strop_4576 serine/threonine protein kinase.
 
 
 0.808
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.688
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.