STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4728PFAM: inner-membrane translocator; KEGG: stp:Strop_4293 inner-membrane translocator. (404 aa)    
Predicted Functional Partners:
Sare_0705
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0763 ABC transporter related.
  
 
 0.832
Sare_4237
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3847 ABC transporter related.
  
 
 0.832
Sare_4729
KEGG: stp:Strop_4294 hypothetical protein.
       0.694
Sare_4727
KEGG: stp:Strop_4292 hypothetical protein.
       0.684
Sare_4730
TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: stp:Strop_4295 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.
       0.653
Sare_4731
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.606
Sare_4732
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.575
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.