STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4776MlrC domain protein; PFAM: conserved hypothetical protein; MlrC domain protein; KEGG: stp:Strop_4334 MlrC domain protein. (489 aa)    
Predicted Functional Partners:
Sare_4777
PFAM: ROK family protein; KEGG: stp:Strop_4335 ROK family protein.
 
     0.836
Sare_4775
PFAM: ROK family protein; KEGG: stp:Strop_4333 ROK family protein.
 
     0.819
Sare_4778
PFAM: extracellular solute-binding protein family 5; KEGG: stp:Strop_4336 extracellular solute-binding protein, family 5.
 
     0.752
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.673
Sare_4774
KEGG: stp:Strop_4332 hypothetical protein.
 
     0.465
Sare_0633
Gluconolactonase; PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: stp:Strop_0658 gluconolactonase.
 
     0.452
Sare_4780
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4338 binding-protein-dependent transport systems inner membrane component.
 
     0.411
Sare_4779
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4337 binding-protein-dependent transport systems inner membrane component.
 
     0.404
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.