STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4787Adenylate/guanylate cyclase with TPR repeats; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: stp:Strop_4346 adenylyl cyclase class-3/4/guanylyl cyclase. (1190 aa)    
Predicted Functional Partners:
Sare_4788
PFAM: beta-lactamase domain protein; KEGG: stp:Strop_4347 beta-lactamase domain protein.
       0.923
Sare_4523
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: stp:Strop_4103 ATP-binding region, ATPase domain protein domain protein.
   
 
 0.846
Sare_4790
KEGG: sco:SCO3576 hypothetical protein.
       0.831
Sare_4524
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: stp:Strop_4104 stage II sporulation E family protein.
 
  
 0.810
Sare_5003
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: stp:Strop_4489 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.745
Sare_4734
KEGG: stp:Strop_4298 hypothetical protein.
  
     0.744
Sare_2480
KEGG: stp:Strop_2337 hypothetical protein.
  
     0.713
Sare_4736
KEGG: stp:Strop_4300 hypothetical protein.
  
     0.707
Sare_4735
KEGG: stp:Strop_4299 hypothetical protein.
  
     0.683
Sare_3632
KEGG: stp:Strop_3390 hypothetical protein.
 
     0.672
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.