STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4889PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_4415 major facilitator superfamily MFS_1. (449 aa)    
Predicted Functional Partners:
Sare_4894
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: stp:Strop_4420 amino acid adenylation domain.
     0.887
Sare_4891
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: stp:Strop_4417 amino acid adenylation domain.
     0.885
Sare_4892
KEGG: stp:Strop_4418 hypothetical protein.
 
     0.877
Sare_4890
TIGRFAM: amino acid adenylation domain; thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility domain; KEGG: stp:Strop_4416 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
     0.852
Sare_4888
Methyltransferase type 12; PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: stp:Strop_4414 methyltransferase type 12.
 
     0.808
Sare_4895
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: stp:Strop_4420 amino acid adenylation domain.
      0.802
kmo-2
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
       0.776
Sare_4030
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_3648 major facilitator superfamily MFS_1.
  
     0.701
Sare_0236
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0208 hypothetical protein.
  
     0.669
Sare_4887
PFAM: coagulation factor 5/8 type domain protein; KEGG: stp:Strop_4412 coagulation factor 5/8 type domain protein.
     
 0.569
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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