STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4948PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3849 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)    
Predicted Functional Partners:
Sare_0635
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_0661 short-chain dehydrogenase/reductase SDR.
  
 
 
 0.711
Sare_2959
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_0374 short-chain dehydrogenase/reductase SDR.
  
 
 
 0.709
Sare_0445
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_0374 short-chain dehydrogenase/reductase SDR.
  
 
 
 0.701
Sare_0583
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dra:DR_1467 short chain dehydrogenase.
 
     0.691
Sare_0671
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_0725 short-chain dehydrogenase/reductase SDR.
  
 
 
 0.683
Sare_4949
PFAM: cytochrome P450; KEGG: stp:Strop_2724 cytochrome P450.
  
   0.618
Sare_2801
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_2602 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.594
Sare_4049
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_3673 short-chain dehydrogenase/reductase SDR.
  
 
 
 0.588
Sare_4947
Putative hydrolase; KEGG: rha:RHA1_ro04639 possible hydrolase.
  
    0.557
Sare_4562
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
  
  
 0.509
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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