STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4985PFAM: Transketolase domain protein; KEGG: stp:Strop_4472 transketolase domain protein. (242 aa)    
Predicted Functional Partners:
Sare_4986
PFAM: Transketolase central region; KEGG: stp:Strop_4473 transketolase, central region.
 
 0.998
Sare_1273
PFAM: Transketolase central region; KEGG: sen:SACE_5762 transketolase B subunit.
 
 0.994
Sare_1865
PFAM: ribulose-phosphate 3-epimerase; KEGG: stp:Strop_1872 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.976
Sare_3889
Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: stp:Strop_3514 ribose 5-phosphate isomerase.
 
  
 0.925
Sare_3316
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: stp:Strop_3089 transketolase; Belongs to the transketolase family.
 
  
 
0.919
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
    
 0.919
Sare_0135
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
 0.909
Sare_3318
PFAM: phosphoglucose isomerase (PGI); KEGG: stp:Strop_3091 phosphoglucose isomerase (PGI); Belongs to the GPI family.
 
   
 0.909
Sare_1272
PFAM: Transketolase domain protein; KEGG: sen:SACE_5763 putative transketolase.
  
  
 
0.905
pfp
Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
    
 0.905
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.