STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_5003PFAM: CDP-alcohol phosphatidyltransferase; KEGG: stp:Strop_4489 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (238 aa)    
Predicted Functional Partners:
Sare_5001
KEGG: stp:Strop_4487 nucleotidyl transferase.
       0.838
Sare_5002
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: stp:Strop_4488 glycerol-1-phosphate dehydrogenase (NAD(P)(+)).
     
 0.792
Sare_4734
KEGG: stp:Strop_4298 hypothetical protein.
  
     0.761
Sare_3632
KEGG: stp:Strop_3390 hypothetical protein.
 
   
 0.756
Sare_4735
KEGG: stp:Strop_4299 hypothetical protein.
  
     0.747
Sare_4787
Adenylate/guanylate cyclase with TPR repeats; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: stp:Strop_4346 adenylyl cyclase class-3/4/guanylyl cyclase.
  
     0.745
Sare_0284
PFAM: phosphoesterase PA-phosphatase related; KEGG: stp:Strop_0243 phosphoesterase, PA-phosphatase related.
 
  
 0.734
Sare_4698
KEGG: stp:Strop_4268 hypothetical protein.
 
     0.734
Sare_5070
KEGG: stp:Strop_4558 hypothetical protein.
  
     0.731
Sare_2480
KEGG: stp:Strop_2337 hypothetical protein.
  
     0.726
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.