STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_0161PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_A4274 putative metallo-beta-lactamase superfamily protein. (306 aa)    
Predicted Functional Partners:
Bphy_0163
PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_A4272 hypothetical protein.
 
     0.835
Bphy_0162
PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A4273 hypothetical protein.
 
    0.828
Bphy_0164
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bxe:Bxe_A4271 hypothetical protein.
       0.790
Bphy_0165
PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A4270 putative hydroxymethylglutaryl-CoA lyase.
  
    0.738
Bphy_1794
KEGG: bxe:Bxe_A2929 putative lipoprotein.
  
     0.671
Bphy_0209
PFAM: VanZ family protein; KEGG: bxe:Bxe_A4221 hypothetical protein.
  
     0.599
Bphy_3331
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bch:Bcen2424_5149 sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
  
 0.575
Bphy_4439
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bxe:Bxe_B0610 transcriptional regulator, LuxR family.
    
 
 0.566
Bphy_3300
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1582 NADH-flavin oxidoreductase / NADH oxidase family protein.
  
 0.553
Bphy_0166
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A4269 putative 2-hydroxyacid dehydrogenase.
     
 0.509
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.