STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_0192KEGG: bxe:Bxe_A4239 hypothetical protein. (85 aa)    
Predicted Functional Partners:
Bphy_0194
KEGG: bxe:Bxe_A4237 hypothetical protein.
 
     0.841
Bphy_2602
KEGG: bxe:Bxe_A0560 hypothetical protein.
  
     0.771
Bphy_0229
KEGG: bxe:Bxe_A4193 hypothetical protein.
  
     0.754
Bphy_0604
KEGG: bxe:Bxe_A0857 hypothetical protein.
  
     0.745
Bphy_4354
KEGG: bxe:Bxe_B2901 hypothetical protein.
  
     0.738
Bphy_2981
PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_A0112 HNS-like transcriptional regulator.
  
     0.729
Bphy_2024
KEGG: bxe:Bxe_A3233 hypothetical protein.
  
     0.722
Bphy_0946
KEGG: bxe:Bxe_A2368 putative inner membrane protein.
  
     0.715
Bphy_4838
KEGG: bam:Bamb_6314 porin, gram-negative type.
  
     0.713
Bphy_0329
PFAM: protein of unknown function DUF1239; KEGG: bxe:Bxe_A4119 hypothetical protein.
  
     0.700
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.