STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_0375PFAM: import inner membrane translocase subunit Tim44; KEGG: bxe:Bxe_A4049 hypothetical protein. (331 aa)    
Predicted Functional Partners:
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
       0.680
Bphy_0376
PFAM: Sterol-binding domain protein; KEGG: bxe:Bxe_A4048 hypothetical protein.
 
     0.677
ubiB
2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
       0.564
Bphy_0373
PFAM: protein of unknown function DUF971; KEGG: bxe:Bxe_A4051 hypothetical protein.
       0.562
Bphy_0371
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bxe:Bxe_A4053 putative oxidoreductase.
 
     0.553
Bphy_0189
PFAM: Domain of unknown function DUF1840; KEGG: bxe:Bxe_A4244 hypothetical protein.
  
     0.545
Bphy_0372
PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A4052 hypothetical protein.
       0.539
Bphy_1424
PFAM: protein of unknown function UPF0005; KEGG: bte:BTH_I2230 hypothetical protein; Belongs to the BI1 family.
  
  
 0.490
Bphy_0378
PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bxe:Bxe_A4046 hypothetical protein.
       0.489
Bphy_2109
KEGG: bxe:Bxe_A3323 hypothetical protein.
  
     0.463
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.