Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_0809PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1053 hypothetical protein. (220 aa)    
Predicted Functional Partners:
Bphy_1463
PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1548 putative iron-sulfur binding protein.
 
 
 0.958
Bphy_5376
TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: reu:Reut_B5446 iron-sulfur cluster binding protein.
 
 
 0.958
Bphy_1464
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A1547 hypothetical protein.
 
 
 0.878
Bphy_5378
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: reu:Reut_B5448 protein of unknown function DUF224, cysteine-rich region.
 
 
 0.877
Bphy_0810
PFAM: Citrate transporter; KEGG: bxe:Bxe_A1054 putative arsenite-anitmonite efflux pump, ArsB family.
       0.803
Bphy_0812
PFAM: protein of unknown function DUF195; KEGG: bxe:Bxe_A1056 hypothetical protein.
 
     0.708
Bphy_2516
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A3980 putative glycolate oxidase iron-sulfur subunit.
 
 
 0.663
Bphy_4256
D-lactate dehydrogenase (cytochrome); PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bur:Bcep18194_B3025 D-lactate dehydrogenase (cytochrome).
 
 
 0.634
Bphy_0811
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A1055 putative 2-ketogluconate reductase.
     
 0.621
Bphy_0371
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bxe:Bxe_A4053 putative oxidoreductase.
  
 
 0.587
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.