STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_0899Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bxe:Bxe_A1296 peptidoglycan-binding LysM/peptidase M23B. (240 aa)    
Predicted Functional Partners:
Bphy_2799
Penicillin-binding protein, 1A family; KEGG: bxe:Bxe_A0354 putative penicillin-binding 1 (peptoglycansynthetase) transmembrane protein, MrcA; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
  
     0.540
Bphy_1268
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bxe:Bxe_A1961 putative penicillin-binding (peptidoglycan synthetase) transmembrane protein, MrcA.
  
     0.535
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
   
 0.527
Bphy_0900
PFAM: Aldose 1-epimerase; KEGG: bxe:Bxe_A1297 hypothetical protein.
       0.521
Bphy_2996
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A3338 TPR repeat protein.
  
 
 0.515
Bphy_2997
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A3339 TPR repeat protein.
  
 
 0.515
Bphy_0898
KEGG: bxe:Bxe_A1295 conserved hypothetical lipoprotein.
       0.464
Bphy_3899
Peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bxe:Bxe_A2197 putative penicillin-binding 1 (peptidoglycansynthetase) transmembrane protein, MrcA.
  
     0.439
ftsI-2
Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.
 
  
 0.432
Bphy_2201
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain protein.
  
  
 0.410
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.