STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_1017Lysophospholipase; PFAM: lipolytic protein G-D-S-L family; KEGG: bxe:Bxe_A2289 arylesterase. (214 aa)    
Predicted Functional Partners:
Bphy_1018
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2288 ABC transporter, ATPase subunit.
 
     0.821
Bphy_2050
PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_A3245 ABC lysophospholipase exporter, fused inner membrane subunits, FtsX.
 
     0.805
Bphy_1016
KEGG: bxe:Bxe_A2290 hypothetical protein.
       0.490
Bphy_1313
KEGG: bxe:Bxe_A1707 hypothetical protein.
  
 
 0.428
Bphy_3258
KEGG: bxe:Bxe_B2038 hypothetical protein.
  
 
 0.428
Bphy_3327
KEGG: bxe:Bxe_A2858 polymorphic membrane protein, filamentous haemagglutinin/adhesin.
  
 
 0.428
Bphy_4291
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bxe:Bxe_A3647 filamentous haemagglutinin.
  
 
 0.428
Bphy_0177
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A4256 putative short-chain dehydrogenase/reductase SDR.
 
  
 0.411
Bphy_3393
KEGG: pla:Plav_0908 phage conserved hypothetical protein, phiE125 gp8.
  
 
 0.403
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.