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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_1237PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A1997 ABC ribose transporter, periplasmic ligand binding protein. (318 aa)    
Predicted Functional Partners:
Bphy_1236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1998 ABC ribose transporter, fused ATPase subunits.
 
 0.987
Bphy_0500
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_4201 periplasmic binding protein/LacI transcriptional regulator.
  
  
 
0.926
Bphy_2242
KEGG: bxe:Bxe_A3673 ABC sugar transporter, periplasmic ligand binding protein.
  
  
 
0.920
Bphy_4302
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B2964 ABC sugar transporter, periplasmic ligand binding protein.
  
  
 
0.916
Bphy_1235
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1999 ABC ribose transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.913
Bphy_5185
KEGG: rso:RS02363 probable signal peptide protein.
  
  
  0.912
Bphy_5157
KEGG: atc:AGR_L_1638 putative simple sugar transport system substrate-binding protein.
     
  0.900
Bphy_5162
KEGG: smd:Smed_5320 putative ABC transporter.
     
  0.900
Bphy_2613
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0548 ABC sugar (arabinose) transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.836
Bphy_0502
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B0886 ABC sugar transporter, inner-membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.833
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.