STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_1596Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A1330 transcriptional regulator, RpiR family. (293 aa)    
Predicted Functional Partners:
Bphy_1595
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1331 myo-inositol 2-dehydrogenase.
 
     0.925
Bphy_1594
PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bxe:Bxe_A1332 putative oxidoreductase.
 
     0.897
Bphy_1597
KEGG: bxe:Bxe_A1329 ABC sugar transporter, periplasmic ligand binding protein.
 
  
 0.823
Bphy_1600
PFAM: PfkB domain protein; KEGG: bxe:Bxe_A1326 putative myo-inositol catabolism LolC protein.
 
   
 0.798
Bphy_1603
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bxe:Bxe_A1323 putative myo-inositol catabolism LolB protein.
 
   
 0.768
Bphy_1602
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bxe:Bxe_A1324 putative myo-inositol catabolism LolE protein.
 
   
 0.763
Bphy_1601
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A1325 putative myo-inositol catabolism LolD protein; Belongs to the TPP enzyme family.
 
   
 0.751
Bphy_1598
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1328 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.597
Bphy_1593
PFAM: SirA family protein; KEGG: bmn:BMA10247_0734 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
       0.524
Bphy_0296
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: bxe:Bxe_A4152 PTS system, N-acetylglucosamine-specific IIBC component.
  
  
 0.453
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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