STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_1638PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A2478 putative oxidoreductase Tas, aldo/keto reductase family. (350 aa)    
Predicted Functional Partners:
Bphy_4997
PFAM: aldo/keto reductase; KEGG: aba:Acid345_2661 aldehyde reductase.
 
 
0.562
Bphy_1639
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2292 major facilitator superfamily MFS_1.
       0.517
Bphy_0553
PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A0784 putative aldo/keto reductase family oxidoreductase.
 
 
0.466
Bphy_5422
PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B1266 aldo/keto reductase.
 
 
 0.465
Bphy_1640
KEGG: bxe:Bxe_A2479 putative cytoplasmic protein.
       0.451
Bphy_1637
PFAM: permease; KEGG: bvi:Bcep1808_1545 permease.
       0.426
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.