STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_1847KEGG: reu:Reut_B5240 conserved hypothetical protein 2246. (141 aa)    
Predicted Functional Partners:
Bphy_5207
KEGG: rso:RSc1547 hypothetical protein.
  
     0.609
Bphy_0910
Putative transmembrane anti-sigma factor; KEGG: bxe:Bxe_A2457 predicted transmembrane transcriptional regulator (anti-sigma factor).
  
     0.574
Bphy_4582
KEGG: rso:RSc2263 probable lipoprotein.
  
     0.558
Bphy_1846
PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A2981 putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily.
       0.541
Bphy_1617
KEGG: bmn:BMA10247_1171 Ser/Thr protein phosphatase family protein.
  
     0.540
Bphy_0789
KEGG: bxe:Bxe_A1032 putative prolin-rich transmembrane protein.
  
     0.470
Bphy_4484
Chloride channel core; PFAM: CBS domain containing protein; Chloride channel core; KEGG: bxe:Bxe_A3930 putative voltage-gated chloride channel with CBS domains.
 
     0.453
Bphy_3641
GP29; KEGG: bam:Bamb_5365 GP29.
  
     0.452
Bphy_4629
PFAM: purine nucleoside permease; KEGG: bxe:Bxe_B0845 concentrative nucleoside/H+ anitporter, CNT family.
  
    0.434
Bphy_1818
PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rle:RL1304 hypothetical protein.
 
     0.412
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.