Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bphy_1915 | Bphy_1916 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | KEGG: bte:BTH_I0108 hypothetical protein. | 0.773 |
Bphy_1915 | Bphy_1917 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.816 |
Bphy_1915 | Bphy_1918 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | KEGG: eba:ebA23 hypothetical protein. | 0.666 |
Bphy_1915 | Bphy_1919 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | KEGG: bbr:BB2205 hypothetical protein. | 0.688 |
Bphy_1915 | Bphy_1920 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | KEGG: acb:A1S_1581 methyltransferase putative. | 0.776 |
Bphy_1915 | Bphy_1921 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | Hypothetical protein. | 0.666 |
Bphy_1915 | Bphy_1922 | KEGG: bvi:Bcep1808_4494 hypothetical protein. | Hypothetical protein. | 0.648 |
Bphy_1916 | Bphy_1915 | KEGG: bte:BTH_I0108 hypothetical protein. | KEGG: bvi:Bcep1808_4494 hypothetical protein. | 0.773 |
Bphy_1916 | Bphy_1917 | KEGG: bte:BTH_I0108 hypothetical protein. | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.768 |
Bphy_1916 | Bphy_1918 | KEGG: bte:BTH_I0108 hypothetical protein. | KEGG: eba:ebA23 hypothetical protein. | 0.666 |
Bphy_1916 | Bphy_1919 | KEGG: bte:BTH_I0108 hypothetical protein. | KEGG: bbr:BB2205 hypothetical protein. | 0.666 |
Bphy_1916 | Bphy_1920 | KEGG: bte:BTH_I0108 hypothetical protein. | KEGG: acb:A1S_1581 methyltransferase putative. | 0.666 |
Bphy_1916 | Bphy_1921 | KEGG: bte:BTH_I0108 hypothetical protein. | Hypothetical protein. | 0.666 |
Bphy_1916 | Bphy_1922 | KEGG: bte:BTH_I0108 hypothetical protein. | Hypothetical protein. | 0.648 |
Bphy_1917 | Bphy_1915 | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | KEGG: bvi:Bcep1808_4494 hypothetical protein. | 0.816 |
Bphy_1917 | Bphy_1916 | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | KEGG: bte:BTH_I0108 hypothetical protein. | 0.768 |
Bphy_1917 | Bphy_1918 | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | KEGG: eba:ebA23 hypothetical protein. | 0.671 |
Bphy_1917 | Bphy_1919 | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | KEGG: bbr:BB2205 hypothetical protein. | 0.687 |
Bphy_1917 | Bphy_1920 | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | KEGG: acb:A1S_1581 methyltransferase putative. | 0.729 |
Bphy_1917 | Bphy_1921 | PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Hypothetical protein. | 0.671 |
page 1 of 3