Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bphy_1978PFAM: peptidase M14 carboxypeptidase A; KEGG: bxe:Bxe_A3179 predicted zinc carboxypeptidase. (388 aa)    
Predicted Functional Partners:
Bphy_1979
PFAM: protein of unknown function DUF328; KEGG: bxe:Bxe_A3180 putative membrane protein DUF328; Belongs to the UPF0246 family.
 
     0.775
Bphy_1786
Arginine/ornithine succinyltransferase, alpha subunit; KEGG: bxe:Bxe_A2922 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine/ornithine succinyltransferase, alpha subunit; PFAM: arginine N-succinyltransferase beta subunit.
  
     0.560
Bphy_1785
KEGG: bmn:BMA10247_1734 arginine N-succinyltransferase, beta subunit; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit.
  
     0.520
Bphy_1980
KEGG: bxe:Bxe_A3181 protein of unknown function DUF132.
       0.517
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
  
     0.426
Bphy_1951
PFAM: Domain of unknown function DUF1857; KEGG: bxe:Bxe_A3146 hypothetical protein.
  
     0.424
astD
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
  
    0.407
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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