Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bphy_1985PFAM: Phosphoglycerate mutase; KEGG: bxe:Bxe_A3186 putative phosphoglycerate mutase. (240 aa)    
Predicted Functional Partners:
Bphy_1984
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A3185 putative enoyl-CoA hydratase, PaaB-like; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.793
Bphy_1983
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A3184 putative 3-hydroxyacyl-CoA dehydrogenase, PaaC-like.
  
    0.773
Bphy_1986
PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A3187 putative tyrosine protein kinase/aminoglycoside phosphotransferase.
 
    0.731
Bphy_0028
PFAM: Patatin; KEGG: bxe:Bxe_A4424 putative patatin-like phospholipase protein.
 
     0.635
Bphy_1982
PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_A3183 putative glutathione S-transferase.
       0.543
Bphy_1987
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3188 putative acyl-CoA dehydrogenase oxidoreductase.
   
   0.522
Bphy_2498
KEGG: bxe:Bxe_A3962 putative thioredoxin protein.
 
   0.514
Bphy_3146
TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bur:Bcep18194_A4821 precorrin-3B C17-methyltransferase region.
  
  
 0.509
Bphy_3676
KEGG: bxe:Bxe_B2165 hypothetical protein.
  
     0.509
Bphy_2477
KEGG: bxe:Bxe_A3870 hypothetical protein.
  
    0.480
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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