Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bphy_2015KEGG: bur:Bcep18194_A5583 ABC branched chain amino acid family transporter, periplasmic ligand binding protein. (423 aa)    
Predicted Functional Partners:
Bphy_1606
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1319 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.839
Bphy_4462
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0658 ABC branched chain amino acid family transporter, fused inner membrane subunits; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.797
Bphy_3041
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0026 ABC branched chain amino acid family transporter, fused ATPase and inner membrane subunits; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.793
Bphy_1607
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1318 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.788
Bphy_0768
KEGG: bvi:Bcep1808_0988 hypothetical protein.
  
     0.667
Bphy_2016
KEGG: bxe:Bxe_A3222 putative lipoprotein.
 
     0.643
Bphy_2602
KEGG: bxe:Bxe_A0560 hypothetical protein.
  
     0.636
Bphy_1605
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1320 ABC branched chain amino acid family transporter, ATPase subunit.
 
  
 0.629
Bphy_1564
KEGG: bxe:Bxe_A1365 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; SMART: PAS domain containing protein.
  
     0.598
Bphy_0458
PFAM: branched-chain amino acid transport; KEGG: bxe:Bxe_A0688 hypothetical protein.
 
     0.577
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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