Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2016KEGG: bxe:Bxe_A3222 putative lipoprotein. (174 aa)    
Predicted Functional Partners:
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
 
 
 0.791
Bphy_4838
KEGG: bam:Bamb_6314 porin, gram-negative type.
  
   
 0.774
Bphy_0604
KEGG: bxe:Bxe_A0857 hypothetical protein.
  
     0.772
Bphy_1345
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
    0.771
Bphy_1082
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1795 outer membrane porin, OmpC family.
  
   
 0.767
Bphy_4271
PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A4111 outer membrane protein, (porin).
  
   
 0.767
Bphy_0674
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0910 outer membrane porin, OmpC family.
  
   
 0.764
Bphy_1157
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0910 outer membrane porin, OmpC family.
  
   
 0.764
Bphy_3606
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1254 outer membrane porin, OmpC family.
  
   
 0.764
Bphy_3034
PFAM: ATP synthase I chain; KEGG: bxe:Bxe_A0033 putative ATP synthase protein I.
  
     0.762
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.