STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2132PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: bte:BTH_I3231 transposon Tn2501 resolvase. (198 aa)    
Predicted Functional Partners:
Bphy_4892
PFAM: Integrase catalytic region; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein.
 
   
 0.481
Bphy_4961
PFAM: Integrase catalytic region; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein.
 
   
 0.481
Bphy_2133
PFAM: heat shock protein DnaJ domain protein; KEGG: bvi:Bcep1808_1533 putative lipoprotein.
       0.471
Bphy_4953
PFAM: Integrase catalytic region; KEGG: pol:Bpro_5204 integrase, catalytic region.
 
   
 0.444
Bphy_2131
Hypothetical protein.
     
 0.417
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.