STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2238KEGG: bxe:Bxe_B1587 hypothetical protein. (462 aa)    
Predicted Functional Partners:
Bphy_3702
KEGG: bxe:Bxe_A1492 hypothetical protein.
  
     0.640
Bphy_4089
KEGG: bxe:Bxe_B1628 hypothetical protein.
  
     0.591
Bphy_1063
KEGG: bxe:Bxe_A2240 putative glycosyltransferase group 1, RfaG-like.
  
     0.551
Bphy_2033
KEGG: bxe:Bxe_A3242 hypothetical protein.
  
     0.546
Bphy_2201
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain protein.
 
0.527
Bphy_0431
PFAM: copper resistance D domain protein; KEGG: bxe:Bxe_A0653 putative copper-resistance transporter, CopD.
  
     0.511
Bphy_0623
KEGG: bxe:Bxe_A0897 hypothetical protein.
  
     0.510
Bphy_2239
KEGG: bxe:Bxe_A3670 hypothetical protein.
       0.505
Bphy_2192
KEGG: bxe:Bxe_B0723 putative adhesin processing HmwC-like protein.
 
     0.498
Bphy_4371
KEGG: bxe:Bxe_B2884 hypothetical protein.
  
     0.487
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.