STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2351PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_5658 extracellular solute-binding protein, family 1. (421 aa)    
Predicted Functional Partners:
Bphy_2349
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3824 binding-protein-dependent transport systems inner membrane component.
 
 
 0.944
Bphy_2350
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_5659 binding-protein-dependent transport systems inner membrane component.
 
 
 0.942
Bphy_2352
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bam:Bamb_4931 beta-galactosidase.
 
  
 0.907
Bphy_2353
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_4930 ABC transporter related.
 
 
 0.807
Bphy_0630
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpd:BURPS668_2995 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein.
 
 
 0.708
Bphy_5437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2081 ABC sugar transporter, inner membrane subunit.
 
 
 0.707
Bphy_0629
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A3450 ABC sugar transporter, inner membrane subunit.
 
 
 0.672
Bphy_5436
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2082 ABC sugar transporter, inner membrane subunit.
 
 
 0.658
Bphy_0492
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0722 ABC sugar transporter, inner membrane subunit.
 
 
 0.636
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.617
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.