STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA-3Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (363 aa)    
Predicted Functional Partners:
Bphy_2381
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4295 binding-protein-dependent transport systems inner membrane component.
 
 
 0.959
Bphy_2380
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4294 binding-protein-dependent transport systems inner membrane component.
  
 0.946
Bphy_2382
PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_4296 ABC spermidine/putrescine transporter, periplasmic ligand binding protein.
 
  
 0.937
Bphy_4323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2931 ABC spermidine/putrescine family transporter, inner membrane subunit.
 
 
 0.887
Bphy_4324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2930 ABC spermidine/putrescine family transporter, inner membrane subunit.
  
 0.851
Bphy_1277
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A1952 ABC polyamine transporter, inner membrane subunit.
 
 
 0.845
Bphy_4322
PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2932 ABC spermidine/putrescine family transporter, periplasmic ligand binding protein.
 
  
 0.817
Bphy_1276
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A1953 ABC polyamine transporter, inner membrane subunit.
 
  
 0.794
Bphy_1279
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.733
Bphy_5068
TIGRFAM: 2-aminoethylphosphonate ABC transport system, membrane component PhnV; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1872 ABC transporter, inner membrane subunit.
 
  
 0.709
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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