STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2397PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aba:Acid345_4738 sulfate transporter. (572 aa)    
Predicted Functional Partners:
Bphy_2742
Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.602
Bphy_2785
KEGG: bxe:Bxe_A0371 protein tyrosine/serine phosphatase.
   
   0.585
Bphy_5216
PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1235 putative exonuclease.
  
   0.570
Bphy_2396
KEGG: reu:Reut_A1207 hypothetical protein.
       0.531
Bphy_1046
PFAM: Ankyrin; KEGG: bxe:Bxe_A2259 putative ankyrin repeat harboring signal peptide protein.
    
 
 0.527
Bphy_4177
PFAM: Ankyrin; KEGG: bxe:Bxe_B1343 ankyrin domain protein.
    
 
 0.527
Bphy_1088
KEGG: rme:Rmet_1758 hypothetical protein.
  
     0.515
Bphy_2395
KEGG: reu:Reut_A1205 hypothetical protein.
 
     0.470
Bphy_1997
KEGG: bxe:Bxe_A3202 putative transmembrane NADH dehydrogenase I(chain M), NuoM; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.442
Bphy_3973
KEGG: bxe:Bxe_B1638 proton-translocating NADH-quinoneoxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.442
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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