STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2462PFAM: acyltransferase 3; KEGG: bxe:Bxe_A3854 putative acyltransferase. (381 aa)    
Predicted Functional Partners:
Bphy_2477
KEGG: bxe:Bxe_A3870 hypothetical protein.
  
     0.687
Bphy_2460
PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3848 hypothetical protein.
 
    0.637
Bphy_1075
PFAM: acyltransferase 3; KEGG: bxe:Bxe_A2227 putative lipopolysaccharide biosynthesis-related membrane protein.
  
     0.631
Bphy_2461
PFAM: acyltransferase 3; KEGG: rru:Rru_A2067 acyltransferase 3.
 
    
0.604
Bphy_2469
PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3861 putative glycosyltransferase.
 
    0.540
Bphy_4153
KEGG: bxe:Bxe_B3026 putative replication protein.
  
     0.451
Bphy_4145
KEGG: bxe:Bxe_B0005 hypothetical protein.
  
     0.407
Bphy_1202
PFAM: Pyrrolo-quinoline quinone; KEGG: bxe:Bxe_A0774 hypothetical protein.
  
     0.405
Bphy_0344
KEGG: bxe:Bxe_A4081 hypothetical protein.
  
     0.401
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.