STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_2857TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bxe:Bxe_A0295 phenylacetic acid degradation protein PaaA. (332 aa)    
Predicted Functional Partners:
Bphy_2858
TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: bur:Bcep18194_A3428 phenylacetic acid degradation B.
 
 0.999
Bphy_2859
TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bxe:Bxe_A0293 phenylacetic acid degradation protein PaaC.
 0.999
Bphy_2860
TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: bxe:Bxe_A0292 phenylacetic acid degradation protein PaaD.
 
 
 0.998
Bphy_2861
TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE.
 
 0.995
Bphy_2692
TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A0467 phenylacetic acid degradation-related thioesterase (PaaI).
 
 
 0.986
Bphy_2693
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.980
Bphy_2691
TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0468 putative enoyl-CoA hydratase II (PaaG); Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.977
Bphy_2863
PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A0289 transcriptional regulator, TetR family (PaaR).
 
     0.692
Bphy_0198
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A4233 putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.645
Bphy_1984
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A3185 putative enoyl-CoA hydratase, PaaB-like; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.645
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.