STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3075TIGRFAM: general secretion pathway protein H; KEGG: bxe:Bxe_A4496 general secretion pathway protein H. (191 aa)    
Predicted Functional Partners:
Bphy_3077
KEGG: bxe:Bxe_A4494 putative general secretory pathway protein J.
 
 
 0.986
Bphy_3078
PFAM: General secretion pathway protein K; KEGG: bxe:Bxe_A4493 putative general secretory pathway protein K.
 
 
 0.986
Bphy_3076
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: bxe:Bxe_A4495 general secretion pathway protein I.
 
  
 0.971
Bphy_3079
TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: bxe:Bxe_A4492 putative general secretory pathway protein L.
 
  
 0.946
Bphy_3080
PFAM: General secretion pathway M protein; KEGG: bxe:Bxe_A4491 putative general secretory pathway protein M.
 
  
 0.939
Bphy_3074
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: bxe:Bxe_A4497 general secretion pathway protein G.
 
  
 0.928
Bphy_3081
PFAM: type II secretion system protein N; KEGG: bxe:Bxe_A4490 putative general secretory pathway protein N.
 
   
 0.927
Bphy_3072
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: bxe:Bxe_A4499 putative general secretory pathway protein F.
 
  
 0.819
Bphy_3071
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.807
Bphy_3070
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bxe:Bxe_A4501 putative general secretory pathway protein D.
 
  
 0.774
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.